Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912386.1_cds_XP_016462477.1_55704
CDS Infomation

[gene=LOC107785643] [db_xref=GeneID:107785643] [protein=pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like] [protein_id=XP_016462477.1] [location=complement(91650..93086)] [gbkey=CDS]
Sequence

ATGCTACGCCAACTTCATCAGAAATTGTGGGGTAGAAAGGTGATTGTTACCCGAATGTAT
AGTTCTAAAGAATCAATGGAAGACAAACTCGATCCGCTGAATAGGCTTTGTAAAATTATG
ATGTCTTGTCCAAAATTGGGCCTTGACACAGAGCTTGACCAAAGTGGGATTAGGATTTCA
TCAGAGATGCTTGACGATGCCCTTAAGAGATTTGAGAATGCTGGAATGCTTGCGTATCGT
TTATTTGAATGGGCTGGGAAGCAACATAATTATGAACATAGCACGAGATCCTACCACATC
ATGATTGAATCTCTTGCCAAGATAAGGCAATATCAGATTATGTGGGATCTTGTAAATAAG
ATGAAAACCAAGGGAATGCTTAATATTGAGACTTTTTGCATAATCATGAGAAAATATGCT
AGGGCGCAAAAAGTAGAGGAAGCTGTTTACACTTTCAATATCATGAACAAGTTCGATGTG
CCCTCTAACCTGGCCGCTTTTAATGGCTTATTGAGTGCTCTATGTAAATCAAAAAATGTG
CGAAAAGCTCAGGAGATTTTCGATAGTAAGAAACATGAATTTGTTCCTGATACAAAAACT
TATAGCATATTGATTGAGGGGTGGGGAAGGGCTCCCAATCTGCCTAAGGCAAGGGAAGTT
TACAGGGAAATGATTGAGGTGGGCTGTAATGCTGATATTGTGACTTATGGGATCATGGTT
GACATCCTTTGCAAGGCTGGTAGGGTCGACAAGGCCGTTGAAATTGTCAAGGAGATGGAG
TTCAGCGGTTGCAGGCCAACATCTTTCATTTATAGTGTTTTAGTTCATACATATGGGCTG
GAAAATCGGATTGAAGATGCGATAGATACATTCCTTGAGATGGAAAAAAATGGAGTTGAG
GCTGATGTAGCAGTATATAATTCTCTAATTAGTGCTTTCTGTAAGGTAAATAAATTCAAA
AATATCTATAGGGTTCTAAATGACATGCAATTGAAGGGGGTGACCCCGAACGCAAGGACT
TGCAATATCATTCTGAGTGGCTTGATTGCTCGAGGTGAGACTGATGATGCTTTTAAGGTT
TTCCGTAGGATGCTCAAAATTTTCGATCCTGATGCAGACACGTACACTATGATGATTAAG
ATGTTTTGCGAGAGGAATGAGCTGAAGATGGCTCATAAAGTGTGGAAATATATGAAACGC
AAGCAATTTGTTCCAGGCATGCACACCTTTTCTGCATTTATTAATGGGCTGTGCGACAAT
GCTGATGTTTCTAAGGCCTGTGTGTTGATGGAAGAGATGATAGAGAAAGGAATGCGTCCT
GGTAGGATGACATTTGAAAAATTAAGACAGTTACTTCTCAAGGAAGGGAGAGAAGATGTA
CTTGAATTCCTTCAGCTGAAAATAAATCTTATGGTGAGGGAGCCCTTGTCTGATTAA

Peptide Sequence

PEP ID

XP_016462477.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Nicotiana tabacum]
Sequence

MLRQLHQKLWGRKVIVTRMYSSKESMEDKLDPLNRLCKIMMSCPKLGLDTELDQSGIRIS
SEMLDDALKRFENAGMLAYRLFEWAGKQHNYEHSTRSYHIMIESLAKIRQYQIMWDLVNK
MKTKGMLNIETFCIIMRKYARAQKVEEAVYTFNIMNKFDVPSNLAAFNGLLSALCKSKNV
RKAQEIFDSKKHEFVPDTKTYSILIEGWGRAPNLPKAREVYREMIEVGCNADIVTYGIMV
DILCKAGRVDKAVEIVKEMEFSGCRPTSFIYSVLVHTYGLENRIEDAIDTFLEMEKNGVE
ADVAVYNSLISAFCKVNKFKNIYRVLNDMQLKGVTPNARTCNIILSGLIARGETDDAFKV
FRRMLKIFDPDADTYTMMIKMFCERNELKMAHKVWKYMKRKQFVPGMHTFSAFINGLCDN
ADVSKACVLMEEMIEKGMRPGRMTFEKLRQLLLKEGREDVLEFLQLKINLMVREPLSD

Transcript Sequence

Gene sequence data has not been registered.